Understanding Nucleotides and Base Pairs - AP Biology

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Question

Which of the following nitrogenous bases is used to produce RNA, but not DNA?

Answer

Uracil is bound to adenine in the production of RNA, while thymine is used in its place in the production of DNA. Adenine, guanine, and cytosine are all used in the production of both RNA and DNA.

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Question

Which of the following DNA primers has the lowest melting point?

Answer

Cytosine and guanine form three hydrogen bonds with each other, while adenine and tyrosine only form two hydrogen bonds. This means that strands of DNA with a higher percentage of cytosine and guanine will have higher melting points.

Since we are looking for the sequence with the lowest melting point, we want the lowest percentage of cytosine and guanine, and the highest percentage of adenine and thymine.

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Question

How many total hydrogen bonds would there be between base pairs of a piece of DNA if the sequence of one side was CGTTTGAC?

Answer

Cytosine and guanine form three hydrogen bonds between each other, while tyrosine and adenine form two hydrogen bonds. We simply need to count how many of each base we have and multiple cytosine and guanine by three, and thymine and adenine by two.

CGTTTGAC has 2 cytosine, 2 guanine, 3 thymine, and 1 adenine.

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Question

What element would you NOT find in either DNA, or RNA?

Answer

DNA and RNA are made of nucleotides, which contain oxygen, hydrogen, nitrogen, carbon, and phosphorus. The nucleic acid backbone is comprised of sugars, made of carbon, hydrogen, and oxygen, and phosphate groups, made of phosphorus, hydrogen, and oxygen. The backbone binds to bases, which contain a nitrogen element.

Potassium is not found in nucleic acid structure, and is used in other parts of the body like muscles and nerves for signal propagation.

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Question

Which of the following choices displays complementary DNA strands?

Answer

When determining complementary strands, there are a few important points to consider. First, remember that uracil is only found in RNA. We can eliminate any answer choices that contain uracil. Second, remember that DNA is anti-parallel. This means that the 3' end of the template strand must match up with the 5' end of the complementary strand. Flip any answers that have both 3' ends together. Finally, make sure that the bases align correctly. Adenine and thymine should always pair and cytosine and guanine should always pair.

Template strand: 3'-ATTGC-5’

Complementary strand is antiparallel: 5'-_ _ _ _ _-3'

Complementary strand must have right base pairs: 5'-TAACG-3'

An alternate way of writing this answer would be 3'-GCAAT-5'. This answer would still be correct! It would simply need to be flipped, as in the second step outlined above.

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Question

A section of double-stranded DNA is composed of 35% adenine bases. What is the percentage of cytosine bases in the section of DNA?

Answer

Since we know that 35% of the bases in the section of DNA are adenine, we can conclude that 35% of the bases are thymine. This is because adenine will always pair with thymine, so there will be just as many thymine bases as adenine bases. Together, adenine and thymine compose 70% of the segment.

This means that 30% of the section is composed of guanine-cytosine pairs.

Since these two bases will be equal in quantity, 15% of the DNA section will be cytosine bases.

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Question

What are the components of a nucleoside?

Answer

This question is mostly about the differentiations between a nucleoside and a nucleotide. A nucleoside is composed of a nitrogenous base and a ribose or deoxyribose sugar. A nitrogenous base, a ribose/deoxyribose sugar, and a phosphate describe a nucleotide. Remember that nucleosides are incomplete nucleotides, and lack a phosphate group.

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Question

In a sample of DNA, 30% of the bases are found to be guanine. What percentage of the bases in the sample are thymine?

Answer

Guanine will pair with cytosine. From this knowledge, we can assume that there will be an equal number of guanine and cytosine residues in the sample. Each guanine must have a cytosine counterpart.

The total composition of the DNA sample must be accounted for by the sum of all the bases.

Use the known values for guanine and cytosine to find the sum of adenine and thymine.

Like cytosine and guanine, adenine and thymine must be present in equal amounts in order to form proper base pairs. We can reasonably assume that half of the remaining DNA will consist of each residue.

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Question

Which of the following is a reason that cytosine pairs more favorably with guanine than thymine or adenine?

Answer

Cytosine and guanine, when base paired, have three hydrogen bonds between them. Adenine and thymine only have two. This extra hydrogen bond helps make the cytosine-guanine pair favorable because it increases stability, and reduces bond energy.

Ionic and covalent bonds do not occur between nitrogenous bases in DNA. Covalent bonds are found in the DNA backbone (known as phosphodiester bonds).

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Question

Chargaff is credited with which of the following discoveries about DNA base pairs?

Answer

Due to DNA's double-helical structure, the nucleotide bases are paired. Adenine is paired with thymine and guanine is paired with cytosine. Chargaff found that there is typically an equivalent number of adenine and thymine bases, and an equivalent number of guanine and cytosine bases. In a given sample of DNA, all adenine residues will have thymine counterparts on the complementary strand, and all cytosine residues will have complementary guanine counterparts. As a result, there will be equal numbers of each residue of the base pair in any sample of double-stranded DNA.

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Question

Which of the following describes the components of a nucleotide?

Answer

Nucleic acids are one of the main biological macromolecules, and include DNA and RNA. A nucleotide is a DNA monomer, while a ribonucleotide is an RNA monomer. Numerous nucleotides are bonded together by phosphodiester bonds to form a single molecule of DNA. The pattern of nucleotides is used to store and transmit hereditary information. A nucleotide is composed of a phosphate group, a nitrogenous base, and a pentose sugar (deoxyribose).

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Question

Which of the following could be a segment of DNA?

Answer

DNA is a double stranded molecule that is antiparallel, meaning the 5' end of one strand matches up with the 3' end of the other strand. Nitrogenous bases hold the strands together via hydrogen bonding. These bases are adenine (A), thymine (T), guanine (G), and cytosine (C). Adenine (A) can only pair with thymine (T), and guanine (G) can only pair with cytosine (C).

The correct answer presents two strands that are antiparallel and show proper binding patterns.

5'-CTAGAG-3'

3'-GATCTC-5'

All other answers have an error in base pairing or ordering.

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Question

A strand of DNA was measured to contain 22% adenine. What is the DNA's composition of the other bases?

Answer

We can use Chargaff's rule to find the remaining compositional percentages. Adenine always pairs with thymine, so their percentages will be equal. Cytosine always pairs with guanine, so their percentages will also be equal. The sum of all four percentages must equal 100%.

We know that the sample is 22% adenine; this tells us it is also 22% thymine.

Since cytosine and guanine are present in equal amounts, we can simply divide their sum by 2.

The final composition is 22% adenine, 22% thymine, 28% cytosine, and 28% guanine.

Uracil is only found in RNA.

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Question

A strand of RNA is composed of 20% adenine and 30% guanine.

What is the strand's composition of the other bases?

Answer

Chargaff's rule only applies to DNA. RNA is single-stranded, and thus, no base pairing occurs.

Think of a strand of DNA. Each base pairs with a specific partner, allowing us to determine their percentages: adenine and thymine are always equal, and cytosine and guanine are always equal. In RNA, with this pairing absent, there is no correlation between the base percentages. A strand could be 20% adenine, 30% guanine, 5% cytosine, and 45% uracil; we simply cannot draw any conclusions.

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Question

An analysis of a DNA sample indicates it contains 35% adenine. What percent of the sample would be cytosine?

Answer

There are four nitrogenous bases found in DNA: adenine, thymine, cytosine, and guanine. Adenine always binds with thymine, and cytosine always binds with guanine.

Since certain bases always appear in pairs, they will have equal percentages of the DNA composition. The percentage of adenine will equal the percentage of thymine, and the percentage of cytosine will equal the percentage of guanine. Together, these percentages will add to 100%.

We know that the sample is 35% adenine, which tells us that it is also 35% thymine.

We know that cytosine and guanine pair together and will be present in equal amounts, so we can divide this final total by 2 to find our answer.

The sample is 35% adenine, 35% thymine, 15% guanine, and 15% cytosine.

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Question

What are the monomers of DNA?

Answer

A polymer is a macromolecule that is made up of subunits that are repeated or very similar. These subunits are called monomers. DNA is a polymer made up of monomer units called nucleotides. Nucleotides are made up of a phosphate group, a five-carbon sugar (deoxyribose, in the case of DNA), and a variable nitrogenous base. There are four different nucleotides that make up the polymer of DNA: thymine, cytosine, adenine, and guanine. These four nucleotides belong to two different classes based on structure. Adenine and guanine are purines that have two carbon-nitrogen rings. Thymine and cytosine are pyrimidines that have only one carbon-nitrogen ring.

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Question

Which base pair can be found in a DNA molecule?

Answer

Within a DNA molecule, there are specific nucleotide binding patterns, a phenomenon called “complementary base pairing.” Specific pyrimidine nucleotides can only bind to specific purine bases: cytosine binds to guanine via three hydrogen bonds and adenine binds to thymine via hydrogen bonds. Normally, within a DNA molecule, no other base pair combinations exist. These specific complementary base pairs allow DNA to take the form of a double helix. The double helix can be most simply described as a twisted ladder; the base pairs and their hydrogen bonds represent the rungs, and the sugar-phosphate backbone represents the sides of the ladder.

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Question

Purine

The given diagrams depict which of the following?

Answer

The diagram depicts two purines (adenine and guanine), identifiable by their pyrimidine-imidazole double-ring structure. Pyrimidines (such at thymine and cytosine) have only one ring, amino acids have both amine and carboxylic acid groups, and ribose and deoxyribose are pentameric sugars (and contain no nitrogen).

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Question

What type of bonding occurs between the two parallel strands of nucleic acids in DNA?

Answer

The bonding that occurs between two parallel strands of nucleic acids in DNA is hydrogen bonding. As you know, hydrogen bonding occurs between molecules containing fluorine, nitrogen and oxygen with other fluorine, nitrogen and oxygen atoms. This is a fairly weak bond but there are so many hydrogen bonds along a strand of DNA making the attachment between the two quite strong, but the two strands can still be separated as needed (during replication and transcription). Adenine and thymine form two hydrogen bonds, while cytosine and guanine form three hydrogen bonds.

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Question

There are __________ hydrogen bonds between the nucleotides adenine and thymine and __________ hydrogen bonds between the nucleotides cytosine and guanine.

Answer

Hydrogen bonds between nucleotides of different strands are crucial for the stability of DNA. Adenine and thymine pair up with two hydrogen bonds between the nucleotides. On the other hand, cytosine and guanine pair up with three hydrogen bonds between the nucleotides.

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